CDS
Accession Number | TCMCG051C44989 |
gbkey | CDS |
Protein Id | XP_024445115.1 |
Location | join(3965370..3965412,3965897..3966000,3966668..3966730,3966854..3966899,3969268..3969516,3971314..3971432,3972438..3972606,3972882..3973968,3974851..3975053,3975189..3975426,3977002..3977338,3977867..3978076,3978222..3978314,3978952..3979158,3980570..3980776,3981463..3981946,3982398..3982591,3982740..3982862,3984282..3984338,3984427..3985572,3986307..3986654) |
Gene | LOC7472543 |
GeneID | 7472543 |
Organism | Populus trichocarpa |
Protein
Length | 1908aa |
Molecule type | protein |
Topology | linear |
Data_file_division | PLN |
dblink | BioProject:PRJNA17973 |
db_source | XM_024589347.1 |
Definition | transcription initiation factor TFIID subunit 1 isoform X3 [Populus trichocarpa] |
EGGNOG-MAPPER Annotation
Sequence
CDS: ATGGGTGGAGGTGGCTATGACTCCGGAAGTGCTTCTGACGATGATGATGACGAGGAATATGAGGAAGTTGGTGGTAACCGATTTTTGGGTTTTATGTTTGGGAATGTTGATAATTCTGGTGATCTTGATGCTGATTACCTTGATGAGGATGCAAAGGAGCATCTTGCCGCATTAGCTGACAAGTTGGGTTCGTCACTAACAGAAATTGATTTGTCAGTGAAGTCACACCAAACATCCACTGACGCTGCAGAACAAGATTATGATGCAAAGGCTGAAGATGCAGTTGATTACGAAGACTTTGATGAACAATACGAGGGGCCTGAGATTCAAGGTGTTAGTGAGGAGGACTACTTGTTGTCAAAAAAGAATTATATTTTGTCTGAATCCACATTGCAGCCTCCTACATCCGACAATGAAGATTATGATGAGGATGTGGAAGAGGAACTTGAAAAGGAACCTGTGGTTTCGGATAAAATTCTTGAATTTCAAACTGCCTCTCTAACAGGTCAGCAAGATGTTGGAGTAGTTTCAGGAGTAGGAGTAGAGAAGTCTTCTCAGGATGATGTAGAACTTGGTTCCATGGATTCTGAAAGTTCTGATGCTAAATCGGAAGATATTCATGAGGAGGAAGCTGATCATGTCAAGGGGCCTCTAGATGGTAAAGGTCCCAGTCCACTTCCTATTTTGTTTATAGAAGATGGGATGGAGATCTTAAAGTTTTCTGAAATATTTTCTATCCATGAACCTTTGAAGAAAGGACAAAAAAGAGATCACAGATATTCCATTTTCAAAGAGAAGTATACATCTATGGATGCTTCTGATATCGTTGAAGAGGATGAAGAGGTGTTTTTAAAGGACTCTGGTCAACTGTTTCCATCACATTTGCTTGTAAATCAACATGACATCTCAATCTTGAGCGAAGATGCTGCAGAATTAGCAAGATTTGGAACTGTTCATGGAGCTATTAAAACGTCTGTTCAAATTGAGGAACAAAGAAAGAACTCTTATCTTAGTGCTGAACCAATGAACGAGGAAGTGGAATGGAAGTCTCCAGTGCATTCAAAATTCTACCCCCTTGATCAGCAAGACTGGGAAGAGAGAATTCTTTGGGACAATTCCCCAGCTATCAGTGACAACTCTGTAGAGAGTTTTGATCTCTCGGGACCTGACACTGGATCTTCATTTATTAGGGAAAGTGAACAAGTGACTAGTCCACAAAATCTTTGTTCGGAGCTCCCAGTGGAGTTAAATGAGAACACCAGTAACTTTCTTCGGAACAGGTCTTCTGTTCTCTTGGAGTCCTTTGGCTCAGAAGACTCTTCAGAACCTGGAAATCTTCCATTCTCAGAAAGCAGATGCCATCCACAACTTCTGAGATTGGAATCTCAGATGGAAGTGGATAGCTCTAGTCATGTTGATGATAGAAGAGAGAATAATAGTGCGGAGCTTCATGAAAGTGATGCTGTAAGGCGTTTCAGCAAGCTCACATTGCAAAATAGAGATTTGATGGAAGGATCTTGGTTAGATAATATAATATGGGAACCAAATGAAACTAACATAAAGCCTAAGCTGATTCTTGATCTTCAAGATAAGCAGATGCTCTTTGAAATTTTGGATCACAGGGATAGTAAGCATCTTCAACTTCACGCAGGGGCAATGATCATAACTCGAACCCTAAAGCAAAGGGTTTCTCATGAGCTACTAGGCCATGGAAATCGATCTGGTTGGCAATTCAACATTGCTAATGACAAGTTCTACATGAACAGGAAAATTTCTCAGCAATTGCAATCAAATTCTAATAAACGAACTGCATATGGCATTAAAATACATCACTCTGCGCCTGCTATAAAGCTTCAGACAATGAAATTGAAGTTGAGCAATAAAGATTTAGCTAATTTTCATCGACCAAAAGCTTTATGGTATCCCCATGACCATGAGGTGGCTGTCAAAGAACGAGGGAAGCTACCTACAGTAGGACCAATGAAAATTATATTAAAGAGCTTAGGGGGCAAAGGAAGTAAGGTACATGTGGATGCTGAGGAAACTGTCTCTTCTGTCAAAGCAAAAGCTTCAAAAAAGCTAGATTTCAAGCCATCAGAAACTGTGAAGATATTTTATTTGAGGAAGGAGCTTGAAGACCACATGTCTCTTGCTGCTCAAAATGTTCAGCCAAACTCCTTGCTTCATCTAGTTCGTACAAAAATTCATTTGTGGCCAAGGGCACAAAAGATTCCAGGTGAAAACAAGTCTCTGCGCCCTCCAGGGGCATTTAAGAAGAAATCTGACCTTTCTGTAAAAGATGGTCACATTTTCCTAATGGAGTATTGTGAGGAAAGACCTTTGTTGTTAAGCAATGTTGGTATGGGTGCTAATCTCCGTACTTACTATCAGAAGTCAAGCCCAGGTGATCAAACTGGCATCTCATTGCGCAATGAAAAAAGAAGCTTGGGTAATGTTGTGATACTGGAGCAGACTGATAAATCCCCTTTCCTTGGAGACATAAAAGCTGGCTGCAGTCAGTCATCTCTTGAAACAAACATGTATAAAGCACCCATATTTCCCCACAAGGTGCCACCTACTGACTATTTGTTGGTTCGTTCTGCAAAAGGAAAGCTTTGTTTAAGACGCATTGACAGGGTTGCTGTCATTGGACAACAGGAGCCCCTGATGGAGGTTTTAGCTCCTGCTTCGAAGAATCTTCAGGCATATATCATAAATAGGTTATTGCTGTATCTTTATCGTGAGCTCCGAGCTGCTGAAAAGCGTGGCACACCTCCTTGGATACGTGCAGATGAGCTATCTGCTCTTTTTCCAAGCATTCCAGAGACCATCTTACGAAAGAAGCTCAAGGAGTGTGCTGTTTTACGGAAGGATGCAAATGGACACTTGTTTTGGGCCAAGAAGCGTGATTTCATCATTCCATCTGAAGAGGAATTGAAAAAGATGGTCTTACCAGAGAATGTCTGTGCTTATGAAAGCATGCAAGCTGGTCTGTATCGTCTTAAACATTTGGGGATTACGAAGCTAACGCTTCCTGCTAGTGTTTCGACTGCAATGAGTCAGCTCCCTGACGAAGCGATAGCTCTGGCTGCTGCATCGCATATTGAGAGGGAACTGCAGATAACTCCATGGAGCCTGAGCAGTAATTTTGTTGCTTGTACAAACCAGGATAGGGCAAACATTGAGCGTCTTGAAATTACTGGTGTTGGTGATCCTTCTGGCCGGGGCTTAGGATTTAGCTATGTTCGTGCTGCTCCAAAGGCACCAATGTCAAATGCAATGATGAAGAAAAAGGCAGGTGCTGGTCGAGGAGGTTCCACTGTTACGGGGACAGATGCAGACTTACGTAGATTGAGCATGGAGGCTGCAAGAGAGGTGCTTCTGAAGTTCAATGTACCTGACGAGCAGATTGCAAAACAGACAAGGTGGCATCGTATTGCCATGATACGCAAGCTATCAAGTGAACAAGCTTCATGTGGGGTCAAGGTTGATCCAACAACTATCAGCAAGTATGCACGTGGCCAACGAATGTCCTTTCTTCAGCTGCAACAACAGACAAGAGAAAAGTGCCAAGAAATTTGGGATCGCCAAGTTCAATCTCTTTCAGCATTGGATGGTGATGAAATTGAAAGTGATTCTGAAGCAAATAGTGATCTGGATTCCTTTGCCGGAGACCTAGAAAACTTGCTTGATGCAGAGGAATTTGAAGGGGACGAAAGTAATTATGAGTCTAAGCATGACAAAGGAGATTGTGTAAAGGGGATAAAAATGAGAAGACGCCCATCACAAGCTCAGGCAGAAGAAGAATTTGAAGATGAAGCTGCTGAGGCTGCTGAACTATGCAGATTGCTTATGGATGTGACTTGCTGTGCTGCAGATGATGAGGCTGGGCAGAAAAAGAAAAAGAAAATAAAAACTGGTGGTCTTAATGCAGTATTGGCACCTAAAAAACCAAGTTTTGTTGACAATGTTCACCGGGGTAAGAAAATGAACAAAACCCAACCCAGTGGATCATATACGCCTAAAGAGAACAGCATCAGAGACTCAAAGGAGGTAGAAACACTGTTTATGAAAGGGAAAGCATCTGAGAAGGTGAATACAGTGAAAAAGAACGTCGGCATCTCTAACACGCCTCCATTGAAAGCAAAAGTAATAATGGCAGATGGACTTAATCACATTTTCAAGGAAAAGAAATCAGCAAGAGAGAAATTCGTATGTGGAGCATGTGGACAGCTAGGACACATGAAGACCAATAAAAACTGCCCTAAGTATGGAAAGGAGCCTGAAACACCGGTAGAAACTACAGATTTGGAAAAGGCTTCCCGAAAATCCACTTCTCAGGATCTCTTGAATGTGTCCCAGCATAAGTTGCAGAAGAAAAGGATGGTCTCCAAAAGTGCAACCAAAGTTGAAGTTTCCGAGGGTGAGAAATCTAGTTTAGCAAAATCTCTTCCAGTGAAGTTCAAGTGTGGTTCCACGGAGAAATTCTCTGATAAACCTGCTGATGGAGCTGCAGATCATTCCGATCAACCTACAACTTCCGATGTCCGACCAGTCAGTTCTGATATTGATACTGGGAGTAGGTCTACTGCTAAGGTTAATAAAATCAAAATTTTTAACAAGGCGAAACCTGAAAACATACAGGTTGAATCACATAAGCCCTCTATTGTGATACGACCTCCAATGGATATAGAGAGAAGCCAAATTGAATCACATAAGCCCTCTATTGTTATACGACCGCCAACATACAGAGACAGAAATCATGTTGATCCTCATAAACCCTCCATTGTGATACGTCCACCAGCTGAGAAAGATAGAGAAAAGACTCAAAAGAAAATTGTTATCAAACAGTCCAAAGAGATTATTGATCCGGACAGGGTCAGTCAGGATGGAAGAACTGGTCGTGAGCATCGGAAGACTAAAAAAATTGCTGAACTATCCAGTTTTGAGAAGCATGGTAAAACCATGCATTTTTCCAGAGAGTCAGCTAAGAGAAAAGCCGAGGACAGAAGCTGGTGGGAAGAGGAGGAGAAGAGGAGAACTGCTGAGAGACTGAGAGAAGAGAGAGCAAGGAGGATTTATGCAGAAGAAATGAGGTCACTTGAAGAACAGGAAAAATTAGCTGACATTAAAAGATACACTGAAACCATCAGATGGGATTGGGATGAAGAAGAACGCCAAAAAGCTAAGAAGAAGAAGAAGAAGATGAAGATGAAAAAGCCCGAAATCAGTGATGATTACTTGGATGACTACAGGGGAGCTAGAAATGGCAGAAGGATGCCAGAAAGAGATCGGGGTGCAAAAAGGCGACCTGTTGTTGATGTGGGGACATATGGTGCTGATTATACCCCAGCAACAAAGCGTCGTAGAGTTGGAGAGGTTGGCTTGGCAAACATCTTGGAAGGTATTGTGGATGCCCTTAAAGATAGGGTAGAAGTGTCCTATCTTTTCTTGAAACCTGTCCCCAAGAAGGAGGCTCCTGATTACTTGGACATCATAAAACGCCCCATGGATCTTTCAACTATTAGGGACAAGGCGAGGAAGATGGAATACAAGGATCGAAATGAGTTCAGACACGATATGTGGCAGATTGCCTACAATGCCCATGTATACAACGACGGGCGGAACCCTGGTATTCCTCCTCTTGCAGACCAGCTTTTGGAACTTTGTGATTACCTGTTGATGGAGAAACAGGAGAGCTTATCTGAAGCTGAAGCTGGTATTTGA |
Protein: MGGGGYDSGSASDDDDDEEYEEVGGNRFLGFMFGNVDNSGDLDADYLDEDAKEHLAALADKLGSSLTEIDLSVKSHQTSTDAAEQDYDAKAEDAVDYEDFDEQYEGPEIQGVSEEDYLLSKKNYILSESTLQPPTSDNEDYDEDVEEELEKEPVVSDKILEFQTASLTGQQDVGVVSGVGVEKSSQDDVELGSMDSESSDAKSEDIHEEEADHVKGPLDGKGPSPLPILFIEDGMEILKFSEIFSIHEPLKKGQKRDHRYSIFKEKYTSMDASDIVEEDEEVFLKDSGQLFPSHLLVNQHDISILSEDAAELARFGTVHGAIKTSVQIEEQRKNSYLSAEPMNEEVEWKSPVHSKFYPLDQQDWEERILWDNSPAISDNSVESFDLSGPDTGSSFIRESEQVTSPQNLCSELPVELNENTSNFLRNRSSVLLESFGSEDSSEPGNLPFSESRCHPQLLRLESQMEVDSSSHVDDRRENNSAELHESDAVRRFSKLTLQNRDLMEGSWLDNIIWEPNETNIKPKLILDLQDKQMLFEILDHRDSKHLQLHAGAMIITRTLKQRVSHELLGHGNRSGWQFNIANDKFYMNRKISQQLQSNSNKRTAYGIKIHHSAPAIKLQTMKLKLSNKDLANFHRPKALWYPHDHEVAVKERGKLPTVGPMKIILKSLGGKGSKVHVDAEETVSSVKAKASKKLDFKPSETVKIFYLRKELEDHMSLAAQNVQPNSLLHLVRTKIHLWPRAQKIPGENKSLRPPGAFKKKSDLSVKDGHIFLMEYCEERPLLLSNVGMGANLRTYYQKSSPGDQTGISLRNEKRSLGNVVILEQTDKSPFLGDIKAGCSQSSLETNMYKAPIFPHKVPPTDYLLVRSAKGKLCLRRIDRVAVIGQQEPLMEVLAPASKNLQAYIINRLLLYLYRELRAAEKRGTPPWIRADELSALFPSIPETILRKKLKECAVLRKDANGHLFWAKKRDFIIPSEEELKKMVLPENVCAYESMQAGLYRLKHLGITKLTLPASVSTAMSQLPDEAIALAAASHIERELQITPWSLSSNFVACTNQDRANIERLEITGVGDPSGRGLGFSYVRAAPKAPMSNAMMKKKAGAGRGGSTVTGTDADLRRLSMEAAREVLLKFNVPDEQIAKQTRWHRIAMIRKLSSEQASCGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSALDGDEIESDSEANSDLDSFAGDLENLLDAEEFEGDESNYESKHDKGDCVKGIKMRRRPSQAQAEEEFEDEAAEAAELCRLLMDVTCCAADDEAGQKKKKKIKTGGLNAVLAPKKPSFVDNVHRGKKMNKTQPSGSYTPKENSIRDSKEVETLFMKGKASEKVNTVKKNVGISNTPPLKAKVIMADGLNHIFKEKKSAREKFVCGACGQLGHMKTNKNCPKYGKEPETPVETTDLEKASRKSTSQDLLNVSQHKLQKKRMVSKSATKVEVSEGEKSSLAKSLPVKFKCGSTEKFSDKPADGAADHSDQPTTSDVRPVSSDIDTGSRSTAKVNKIKIFNKAKPENIQVESHKPSIVIRPPMDIERSQIESHKPSIVIRPPTYRDRNHVDPHKPSIVIRPPAEKDREKTQKKIVIKQSKEIIDPDRVSQDGRTGREHRKTKKIAELSSFEKHGKTMHFSRESAKRKAEDRSWWEEEEKRRTAERLREERARRIYAEEMRSLEEQEKLADIKRYTETIRWDWDEEERQKAKKKKKKMKMKKPEISDDYLDDYRGARNGRRMPERDRGAKRRPVVDVGTYGADYTPATKRRRVGEVGLANILEGIVDALKDRVEVSYLFLKPVPKKEAPDYLDIIKRPMDLSTIRDKARKMEYKDRNEFRHDMWQIAYNAHVYNDGRNPGIPPLADQLLELCDYLLMEKQESLSEAEAGI |